PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019182611.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 232aa    MW: 25364.2 Da    PI: 9.3861
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019182611.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.2e-08120160954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P       +K++ a++L +Av+Y+k L
  XP_019182611.1 120 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAVHYVKFL 160
                     699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MDVNLMKSSS ENEMEIMTLL TMRPNNPPHQ PLDDNLGFSI HNPYGGATLS FSGVEQHPVG  60
AAAADPPRHK SSSNGGSMEA MREMIFRIAM MQPIHIDPES VKPPRRKNVK ISKDPQSVAA  120
RHRRERISEK IRILQRLVPG GTKMDTASML DEAVHYVKFL KKQLEYLEAA ASGPTTIAAA  180
APGFPTTMSP TLLDMNMNMN LMNYYSSSSS SGSMKAACQA VPSMGSNLQM LS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.12e-47bHLH family protein