PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019183280.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 258aa    MW: 29104.5 Da    PI: 8.0724
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019183280.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.62.3e-13150251199
                     EEEE-..-H.HHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
              B3   1 ffkvltpsd.vlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                     f+kvl+  d  lk++rl +pk++ae++  ++  + ++ +++ d++g++We+ ++   + +s++yvl+ G +++  a++ ++gD+v+F   ++  +
  XP_019183280.1 150 FEKVLSATDtDLKLSRLFIPKTCAETFfpDLCGRHGMPISILDTEGKQWEFFIRCwpNPSSKTYVLE-GLRDYIIAKKWQAGDIVTFC--QTkPG 241
                     67777655515677**********999**444456788***************87355556669999.********************..45499 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     ++l+++++++
  XP_019183280.1 242 GKLMMGLRKT 251
                     9999999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MSSLQLQLQL RRFQKRLAPP QRSAYDEGKF CETFHSNDDG WRDCEACGKL VHCGCIVSFN  60
TYLLLDFGGI MCIECSKISF ILEHFLFLQA YPPNSARNRC MYPASPLPFG DPQQDPSRKN  120
QKESQYCPHA NGSELQQICT IPGSIVTPLF EKVLSATDTD LKLSRLFIPK TCAETFFPDL  180
CGRHGMPISI LDTEGKQWEF FIRCWPNPSS KTYVLEGLRD YIIAKKWQAG DIVTFCQTKP  240
GGKLMMGLRK TSTGSASS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32010.14e-32B3 family protein