PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019183373.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 224aa    MW: 24574.9 Da    PI: 9.0909
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019183373.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.4e-1076118954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     E+ RRdr+N++f eL  +l +    + +K +K++iL  Av+ + +L
  XP_019183373.1  76 EKLRRDRLNDRFTELSAILEPG---KVPKTDKSAILVDAVRVVTQL 118
                     9********************9...9***************99888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MVLQENTNWL YDYGFEDISV ADTNFSVSGS GFSWSAQTLN GSSSLSAELD GSKETGSKKR  60
SRAESCAPSS SKACGEKLRR DRLNDRFTEL SAILEPGKVP KTDKSAILVD AVRVVTQLRI  120
EAQKLKASNL NLQEKIKELK AEKIELRDEK QRLKAEKEKL EQQLKTMNAQ PGFMPPAIPA  180
AFAAQGQVSK LVPVISYPGV ATWQFLPPAA VDTSQDHVLR PPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.13e-70bHLH family protein