PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019183521.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 231aa    MW: 25454.5 Da    PI: 8.3738
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019183521.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96e-193482355
             AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++GVr ++ +g+++AeIrd ++    ++r++lg+f +ae Aa+a++aa+++l+g
  XP_019183521.1 34 FRGVRKRP-WGKFAAEIRDpWK----KTRVWLGTFNSAEAAARAYDAAARNLRG 82
                    8*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MRRGRAPPEF KQSPEAAAAV GEANGSGGSK EIRFRGVRKR PWGKFAAEIR DPWKKTRVWL  60
GTFNSAEAAA RAYDAAARNL RGPKAKTNFP LPAPSHLPPY HNLQFNQRPN ANDSFVDQQM  120
YMQEHPILSQ RPTSSGMSST VESFSGPRPP RQQTAAALPS RRHPVSQPVV PDDCHSDCDS  180
SSSVVDDMDC ENIASSSFRK PLPFDLNLPP AVEYNVDAEA YELQCCTALC L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.15e-40ERF family protein