PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019183649.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YB
Protein Properties Length: 248aa    MW: 28159.6 Da    PI: 7.0613
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019183649.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB90.91.2e-28100189594
           NF-YB   5 drflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 
                     ++ +P++ + +im +++ +n +i++daketvq+cv+efi +vt++a++++++e+rkt+ +ddllwa+   G+ +y+e l+ ++  y e +
  XP_019183649.1 100 QNDIPLSIILKIMGRAIHGNMRIADDAKETVQKCVTEFIHYVTAKANERSRQEQRKTVIADDLLWAMNAPGLRNYAEVLTDFIISYCEQQ 189
                     56689*********************************************************************************8864 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MYKLPLQFES LRRFAVEPSS ESRDVVEPSS ESRDAVEPER EAFADSPWSI RRRAEMPWSL  60
RRRAEMPWSL RRRAETPWAM AGETNANTVA LTQQRRRAPQ NDIPLSIILK IMGRAIHGNM  120
RIADDAKETV QKCVTEFIHY VTAKANERSR QEQRKTVIAD DLLWAMNAPG LRNYAEVLTD  180
FIISYCEQQE YDRAATHPLP PPIHHVPFNS YAVQQGFSVP EFSPGPMNNT GGSASSSSPY  240
GSGYFIDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21970.14e-27NF-YB family protein