PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019183691.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 157aa    MW: 17510.7 Da    PI: 8.9514
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019183691.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.6e-171766255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     ykG+r +k +g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  XP_019183691.1 17 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTPVAAARAYDIAVYYLRG 66
                    59*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MEMEGQVGGG KRKNERPYKG IRMRKWGKWV AEIREPNKRS RIWLGSYSTP VAAARAYDIA  60
VYYLRGPSAR LNFPELLAGD GGGLSDLSAA SIRKKAIEVG SRVDATQSSI AAEDDDRREN  120
APATAQTQPG ILKACWFEEK PDLNKKPEPE DPDVDYW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50260.11e-46ERF family protein