PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019183704.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 331aa    MW: 35826.8 Da    PI: 10.0621
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019183704.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.78.8e-32260317359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh+
  XP_019183704.1 260 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERAVDDPTMLIVTYEGEHNHS 317
                     99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MAVELMMSYC RNVDVNGGGG GRIGFVKSLE ESAVVKEAAS GFESVEEFIR LLSQGKKQGK  60
AAMEIDVVAD VAVNKFKKVI DLLGRTRTGH ARFRRGPVAS SPPPPADNKV YSPTPIQQVP  120
PPASYDYSAA AHRFFQAVER KDSAAAPPPP MTISFTCSPE ISRANSFNIS SLTGETESKP  180
MLSSSSAFQL TNLSQVSSAG KPPLSTSSLK RKCSSSENNL SGKCSGSSSR CHCSKRKKLR  240
LKRVTRVPAI SMKLSDIPPD DYSWRKYGQK PIKGSPHPRG YYKCSSVRGC PARKHVERAV  300
DDPTMLIVTY EGEHNHSVSV AETNGLILES S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.16e-75WRKY family protein