PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019184147.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ZF-HD
Protein Properties Length: 243aa    MW: 26812.1 Da    PI: 7.6474
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019184147.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer963e-3061114357
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 
                      v+Y eClkNhAa++Gg+a+DGCgEfmp+ ge+g+ +alkC+AC+CHRnFHR+  
  XP_019184147.1  61 DVKYMECLKNHAAAMGGTATDGCGEFMPA-GEDGSLEALKCSACQCHRNFHRKLI 114
                     689*************************9.999*******************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MSQENKKPLL SAAGNASCSK HEEEEEHNNV INAQMVPFVA SSSAMEVIET HKPYCCNRYN  60
DVKYMECLKN HAAAMGGTAT DGCGEFMPAG EDGSLEALKC SACQCHRNFH RKLIIKGCPW  120
ASCSFTFPCS QNKGATPPLA YNNNNNTSSG GGGGVSDWEA EKEDAAAAEE EGLERKKRFR  180
TKFSGEQKEK MVAFAERVGW KIQNAESSVV HHFCQEIGVK RRVLKVWMHN NKNNFAAQAR  240
PTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.13e-51ZF-HD family protein