PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019184460.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 371aa    MW: 39858.9 Da    PI: 8.692
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019184460.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.17.5e-28175235259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqKe+ gs+fpr+YYrCt++   +Cp+kk+v+r +++p ++++tY+++H ++
  XP_019184460.1 175 EDGYTWRKYGQKEILGSRFPRAYYRCTHQklySCPAKKQVQRLDDNPFMFQVTYRSNHICH 235
                     7****************************9999*************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MMSRPNDHLK ISKKQQEMDE NMITTALMMT ILRGIQQAKD LEPNLAHNLA SRRDYIARAC  60
DDIVRVFSSV RERVSSSSPP QVIAPPPLQL GGVLDHTWLS TTAAHDPHLF QPHMVAPLPL  120
PAQPVAAAAA RVHRSGSCGG VPAAQRPRRL RRDEIDRHTK IVEAPQMGNV DIPPEDGYTW  180
RKYGQKEILG SRFPRAYYRC THQKLYSCPA KKQVQRLDDN PFMFQVTYRS NHICHMSATA  240
PSSAPPPLQP PPTTSSGGAV TGSWLTMDIK PQPPGEAAGT SSGGPFGGGH AVSVSSTSNV  300
PVAAGSGTAG PSTARYDRDV VGGSGGGDYG GQPVVDLVDV MFNYSGSSSN NSMDLIFPST  360
DQKGDISGEK N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.14e-40WRKY family protein