PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019184661.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 197aa    MW: 21829.9 Da    PI: 9.143
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019184661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM142.42.6e-4471341128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     l pGfrF+Pt eel+ +yL++kv + +l++ +vi e+ +++kv+PwdLp      + e+yfFs+r+ k+ +g+r +rat sgyWkatgkdk++++
  XP_019184661.1   7 LLPGFRFRPTGEELILHYLNPKVLNLPLPA-DVILEIdNVCKVDPWDLPGG---LDGEMYFFSTREVKNGSGNRCSRATLSGYWKATGKDKKITV 97 
                     579***************************.88888868**********44...4669************************************* PP

             NAM  95 k...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +   +g +vg+kktLvfy+g+ ++ +ktdW+mh+yrl
  XP_019184661.1  98 SgeaQGGVVGMKKTLVFYEGKPSNDSKTDWIMHDYRL 134
                     96666667***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MDNLSLLLPG FRFRPTGEEL ILHYLNPKVL NLPLPADVIL EIDNVCKVDP WDLPGGLDGE  60
MYFFSTREVK NGSGNRCSRA TLSGYWKATG KDKKITVSGE AQGGVVGMKK TLVFYEGKPS  120
NDSKTDWIMH DYRLGDAPQP QANLVLCRIF LKKRGRERSR ATSLIPAFRD FFGAERADLN  180
LAPVSSSSSR SSSVTES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.15e-60NAC family protein