PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019184781.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 267aa    MW: 29018.4 Da    PI: 9.4761
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019184781.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.14.7e-14116160347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +W++eE+ +++ + ++lG g+W+ I+r++ ++Rt+ q+ s+ qky
   XP_019184781.1 116 PWSEEEHRIFLVGLEKLGRGDWRGISRHFVTTRTPTQIASHAQKY 160
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MTRKCSSCGK TGHNSRTCNN NNEQRTSSHG GSMKLFGVKL IGSHQNYSSS SSYSFVMKKS  60
FSDDCLPAAS YSFADSSFGS SGFLFDENFD GKVPGCGYIS DGLVCGNLPE KKRGVPWSEE  120
EHRIFLVGLE KLGRGDWRGI SRHFVTTRTP TQIASHAQKY FLRHNSLHST KRRRSLFDLA  180
WKADECRVLC GKMAKSTSSS IIDFSSTATS SAIALSSPRQ DSKSSQYSNI ISASSLSSNM  240
NIGVHQSPSP PPSPDLELTL GGTISVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.14e-40MYB_related family protein