PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019184931.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 223aa    MW: 23688.5 Da    PI: 4.6119
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019184931.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.2e-193888155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  XP_019184931.1 38 PVYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 88
                    68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MMSAESSPDS PVSVVNCGGG EEVSGQKMKR IRDSSKHPVY RGVRMRSWGK WVSEIREPRK  60
KSRIWLGTFP TPEMAARAHD VAALSIKGSS AILNFPDLAG LLPRPESLSP RDIQSAAAKA  120
AAMEKFDLPS PSSHSSSSST SSLSSLVSAI DIATSEELSE IVELPSLDTS FDSLGLGGEI  180
VYVDSVEEWL YPPPSWLGGA ADDGGGGGPG IISGGFESSW WEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.13e-65ERF family protein