PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019184993.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 461aa MW: 50519.4 Da PI: 9.8515

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019184993.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.7	2e-32	185	240	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers d ++ e++Y+geHnh XP_019184993.1 185 DGYNWRKYGQKQVKGSEYPRSYYKCTHPKCPVKKKVERSL-DDQIAEVVYKGEHNHA 240 9*************************************.99***********7 PP
2	WRKY	100.9	7.7e-32	380	437	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+vkg+++prsYYrCts++C+v+k ver+ +dpk++++tYeg+Hnh+ XP_019184993.1 380 RDGFRWRKYGQKVVKGNTYPRSYYRCTSPKCNVRKYVERAPDDPKAFITTYEGKHNHD 437 7********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MEIKEVKKIA VAKPVATRPT CSTYRPFSEL LSGAINGSST GGCSQTAVIA AIRPKTVRLR 60 SAGNQTLGGK VEMPGVSVRS PPANVLKSDD KPTIVYKPMP KLLSKTTFPQ NLNMRSSTSS 120 QQNEAAEETS QVKPSDVRLE AHQSLSLKSG TDKKPVDHSK MAMQNTEDNE RSLFQASGVD 180 CLSGDGYNWR KYGQKQVKGS EYPRSYYKCT HPKCPVKKKV ERSLDDQIAE VVYKGEHNHA 240 KPQLPRSNLR DGQPKGVLVS EDTCNETNNP VRRSEQLTLQ NEPCGPSTEH KNNTMLSTRS 300 TYSSGAPPPF HGAASTPENS CAPSGIHREG SQGLEAEGDE PKGKRRKCGS QTHDGATLGN 360 GAMETTQTVV GSTTDSETTR DGFRWRKYGQ KVVKGNTYPR SYYRCTSPKC NVRKYVERAP 420 DDPKAFITTY EGKHNHDVPT RNPNPEPSRS STRAAATKEK S

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MEIKEVKKIA VAKPVATRPT CSTYRPFSEL LSGAINGSST GGCSQTAVIA AIRPKTVRLR  60
SAGNQTLGGK VEMPGVSVRS PPANVLKSDD KPTIVYKPMP KLLSKTTFPQ NLNMRSSTSS  120
QQNEAAEETS QVKPSDVRLE AHQSLSLKSG TDKKPVDHSK MAMQNTEDNE RSLFQASGVD  180
CLSGDGYNWR KYGQKQVKGS EYPRSYYKCT HPKCPVKKKV ERSLDDQIAE VVYKGEHNHA  240
KPQLPRSNLR DGQPKGVLVS EDTCNETNNP VRRSEQLTLQ NEPCGPSTEH KNNTMLSTRS  300
TYSSGAPPPF HGAASTPENS CAPSGIHREG SQGLEAEGDE PKGKRRKCGS QTHDGATLGN  360
GAMETTQTVV GSTTDSETTR DGFRWRKYGQ KVVKGNTYPR SYYRCTSPKC NVRKYVERAP  420
DDPKAFITTY EGKHNHDVPT RNPNPEPSRS STRAAATKEK S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	1e-88	WRKY family protein