PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019185141.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family FAR1
Protein Properties Length: 140aa    MW: 15484.5 Da    PI: 8.4509
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019185141.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR153.67.1e-1743121282
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkle 82 
                      Yn YA++vGFsvrk +++++  +++i +++f C k g++++ ++    +  ++   rtgC a ++     dg w vtk  
  XP_019185141.1  43 LYNGYAYRVGFSVRKGQQRYKASTKSIQMKRFFCAKAGYKQKPNSG--VKLYSKIDMRTGCGAFVQFDVGGDGMWTVTKHL 121
                     7****************************************99887..888999***********************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
CVGDSISNDQ AELNIDIDGS SSSPVDEDLV GVVVRNVDEA FELYNGYAYR VGFSVRKGQQ  60
RYKASTKSIQ MKRFFCAKAG YKQKPNSGVK LYSKIDMRTG CGAFVQFDVG GDGMWTVTKH  120
LKEAQSRVMF IWQESSASVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.14e-12FAR1 family protein