PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019185192.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family G2-like
Protein Properties Length: 326aa    MW: 36075.9 Da    PI: 6.733
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019185192.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like98.35.4e-31200255156
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                     k+r++W+peLH+rF++a+++LGG++ AtPk+i ++m v+gLt+++vkSHLQkYRl+
  XP_019185192.1 200 KQRRCWSPELHQRFIDALDKLGGAQAATPKQIIDIMRVDGLTNDEVKSHLQKYRLH 255
                     79****************************************************97 PP
2Myb_DNA-binding40.66e-13202253148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W++e++++++da  +lGg    t+k I   m   g+t  ++ks++qky+
   XP_019185192.1 202 RRCWSPELHQRFIDALDKLGGAqaaTPKQIIDIMRvDGLTNDEVKSHLQKYR 253
                      568*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MGANGRKLSI DLNSEFGVPK TISDCLAEVS ATGDVSLKLS KLSYFLHALE EESRKIDAWR  60
RELPLSMHII NLAIEKVKEE VLQVKRKEEG PVMEEFLPVK GDSDESDKKN WMNSATLWNN  120
PVEFKHRNSV EDEDIQFRPG EFKNEGGAFQ PYKKIAAAAA EKAALPINGL PASTPLSIDL  180
RLKSGGGGGG SRNSQPQSKK QRRCWSPELH QRFIDALDKL GGAQAATPKQ IIDIMRVDGL  240
TNDEVKSHLQ KYRLHVRRLP PPSSSVEQRI DALKVAKIAA QSGSPEGPLH LSASGKEISM  300
TLTNIPEEEE EDDISESSWK KQGHIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.15e-50G2-like family protein