PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019185231.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ZF-HD
Protein Properties Length: 235aa    MW: 26504.3 Da    PI: 6.8301
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019185231.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer43.29.2e-1453822959
     ZF-HD_dimer 29 mpsegeegtaaalkCaACgCHRnFHRrevee 59
                    mp+ ge gt +alkCaAC+CHRnFHR+e ++
  XP_019185231.1 53 MPA-GEYGTLDALKCAACNCHRNFHRKEINT 82
                    455.5669*******************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MEFEDQQHSG GNGTGPSYDS LSNSNSAHPR MPEDDDNGGG DLPVTEPPLQ MRMPAGEYGT  60
LDALKCAACN CHRNFHRKEI NTAAALIPVG YHHHHRAPSG YLHHHHHHHH APLQRPLALP  120
SISGSAYREE MEELDLDMDT ATPNSGGGGS KGKRFRTKFT EVQKEKMVEL AERLGWRIQK  180
ESEEAVEQFC IEYGVRRHVF KVWMHNNKHT VAKKTLEQNN NNNTTNQPDQ DPPRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.17e-42ZF-HD family protein