PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019185274.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 268aa    MW: 31185.9 Da    PI: 10.3502
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019185274.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.15.5e-12241011594
                     -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     r+ +p kf+++h++k  ++ t +l++e+g sW++++i r + + ++ ++ W++F+k ++L+ gD ++  l+g+s fe +v
  XP_019185274.1  24 RIQIPSKFVDTHKNK-LGGSTWVLRTEDGTSWSMEII-REGTECFFGRADWEKFAKHHDLRFGDQIMAFLVGNSVFEVMV 101
                     789*********755.6677****************4.44444477889****************999999999995555 PP
2B338.81.7e-121892641495
                     T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                       +++p +fa+e g++  ++k ++l+ e+gr+ +v++      +r+ l kGWk+F kan++++gD + F+l++ ++  l+vk
  XP_019185274.1 189 TFMCVPVDFARETGII--NQKRIVLRGENGRRETVQI--GHLCNRVNLIKGWKSFKKANKIRSGDKCSFTLVNPDS--LFVK 264
                     34789********999..5568***************..99999999***********************986433..3555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MKVNPHGYPS FLKTYLGEAR YWERIQIPSK FVDTHKNKLG GSTWVLRTED GTSWSMEIIR  60
EGTECFFGRA DWEKFAKHHD LRFGDQIMAF LVGNSVFEVM VYSQTTCCRV LYPNPHPTAN  120
EEASRNAKKQ KRKYVFRNKS KGSSDMKEEI FDIKNVKQEE GLQTKRYSTV NLKAKCPYFE  180
TIVKKSHQTF MCVPVDFARE TGIINQKRIV LRGENGRRET VQIGHLCNRV NLIKGWKSFK  240
KANKIRSGDK CSFTLVNPDS LFVKKLRH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.12e-14B3 family protein