PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019185295.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 145aa    MW: 15995.9 Da    PI: 6.5195
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019185295.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.5e-181061155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s y GVr ++ +g+++AeIrd + ng  +r+++g+f  ae+Aa a+++a+++++g
  XP_019185295.1 10 SNYIGVRKRP-WGKYAAEIRDSTRNG--TRVWIGTFNCAEDAALAYDQAALAMRG 61
                    5699******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
METDTSAKAS NYIGVRKRPW GKYAAEIRDS TRNGTRVWIG TFNCAEDAAL AYDQAALAMR  60
GTSASLNFPA EFVRKSLEEL DCKEGTSMAA ALKEKHKKRT RRHGKANPPS CEKEEETNNN  120
GVLVFEDLGS DLLDELLSQT SSSCM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.19e-28ERF family protein