PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019185300.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 237aa    MW: 26676 Da    PI: 7.0264
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019185300.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.63.9e-074594254
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +  + erE++ Rd++N  f+eL  +l  +   +++   Ka iL+++++ +++L
  XP_019185300.1 45 KIHKAEREKQKRDNMNVLFAELANVLADP---SHQNYGKACILKETMRLVREL 94
                    667889***********************...9************99988776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MASEASTPVN DCAVHVFSSS RKRKHDKAPR NHEAEREPSN KVPRKIHKAE REKQKRDNMN  60
VLFAELANVL ADPSHQNYGK ACILKETMRL VRELIVQVDN LRKENVALNS ESHYMIVEKD  120
ELKEEKIALE VQIENLLTKI NETIRSQTTN ITSPPQLTED HLRTSIHDYA SSSAAATGPV  180
LVVPLHNDLQ MYSTADNPEA LQNLPPSVSR PRPRYPSPSD SWPSRVLNVA SSTTEDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.22e-23bHLH family protein