PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019185378.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 239aa MW: 24974.9 Da PI: 8.6893

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019185378.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.8	2.3e-38	26	85	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++l+cprCdstntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s XP_019185378.1 26 PEHLRCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRS 85 57899***************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MPSADTSDQR RPAKQQQQVG APPPEPEHLR CPRCDSTNTK FCYYNNYNFS QPRHFCKSCR 60 RYWTHGGTLR DIPVGGGSRK NAKRSRTIPS SSSGTAAAAA AAHAFSPAIS AHDFRHSAAP 120 SSFLFPLGSD HAGSVPFPGD MVKPGLNVCG SFTSLLNTQG PGLLLGGFGL GPTIDDMGYG 180 FSRAVWPFPG VPEGAGNGGG AAVLSGGPWQ LSTGENAFVN GDCFGLPDLA ISTQGTGMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50410.1	6e-47	Dof family protein