PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019185467.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 465aa    MW: 50839.8 Da    PI: 8.8167
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019185467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.84.7e-33226282259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +DgynWrKYGqK vkgse+prsYYrCt+ +C v+kkvers  d++++eitY+g+Hnhe
  XP_019185467.1 226 SDGYNWRKYGQKLVKGSECPRSYYRCTHLNCAVRKKVERSP-DGHIIEITYKGKHNHE 282
                     7****************************************.***************7 PP
2WRKY1054e-33384442159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+ +prsYYrCt++gC+v+k+ver++ dpk+v++tYeg+Hnh+
  XP_019185467.1 384 LDDGYKWRKYGQKVVKGNANPRSYYRCTYKGCNVRKHVERASADPKAVITTYEGKHNHD 442
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    
MGESREGVSA VSGPPRPTIT IPPRAPFDTL FALGSIPGFS PGPMTLMSSF FSDSDACSFS  60
QLLAGAMASP LANPTLLPDN PLKVGDSGPG SEKLSGYKQK QPMSLLVAQS PLFMVSPRFS  120
PSGLLNSPGF LSPLQSPFGM SHQQALAHVT AQAAFNHSYK QMQAEYQHSS SVEGAGHQTS  180
SSMPNQGVQG EAANVALDPE SLKVETSELS QVDGKVSSGA IEKPASDGYN WRKYGQKLVK  240
GSECPRSYYR CTHLNCAVRK KVERSPDGHI IEITYKGKHN HEIPKSNKRK LDDCDRESRE  300
DNSREKPQSG SRSWTETNRS NKVVCSQPET VSKRNEMEET ATVLDEKDDG EPNAERRISE  360
AGSSHKTVME PKIIVQTRSE VDLLDDGYKW RKYGQKVVKG NANPRSYYRC TYKGCNVRKH  420
VERASADPKA VITTYEGKHN HDTPNAPNNN HSVTNKSSIQ KLVAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.11e-114WRKY family protein