PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019185675.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 202aa    MW: 22114.4 Da    PI: 4.8839
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019185675.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.4e-184494255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y GVr ++ +g+++AeIrd + ng  +r++lg+f +aeeAa a+++a+  ++g
  XP_019185675.1 44 HYVGVRKRP-WGKYAAEIRDSTRNG--TRVWLGTFNSAEEAALAYDQAAVLMRG 94
                    79*******.**********44465..**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MGGGGEIIKQ ESDMIFSGEV KSSEVENNGD PRENNSNKSP KEKHYVGVRK RPWGKYAAEI  60
RDSTRNGTRV WLGTFNSAEE AALAYDQAAV LMRGPSSCLN FPVERVNESL QEMGCYSSCK  120
DGWSPAEALK ERHKKRSSRG KRKQAEDGGG GGGVVGYAFR DEKAAQDCCC DGDDLPPLVF  180
EDLGPDLLDQ LLSESYTSSS YQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.18e-27ERF family protein