PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019185676.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 152aa    MW: 17367.6 Da    PI: 9.6705
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019185676.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.33e-211565255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr ++ +gr++AeIrd + ng  +r++lg+f+taeeAa a+++a+++++g
  XP_019185676.1 15 RYRGVRKRP-WGRYAAEIRDSTRNG--ARVWLGTFDTAEEAALAYDQAALSMRG 65
                    8********.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MEFSSDDNKL RVEKRYRGVR KRPWGRYAAE IRDSTRNGAR VWLGTFDTAE EAALAYDQAA  60
LSMRGKSAFL NFPTEKVQES LDNMEYWCEE GSSPAATLKA TNKMTMRRRK LQRKKKKKKK  120
NDDDENGSVL VFEDLGTELL EELLTSSSMA AA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107120RRRKLQRKKKKKKK
2108121RRRKLQRKKKKKKK
3109122RRRKLQRKKKKKKK
4112119QRKKKKKK
5113119RKKKKKK
6114120RKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.15e-33ERF family protein