PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019185852.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 314aa    MW: 35594.3 Da    PI: 4.6583
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019185852.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH54.81.7e-174391254
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    r +h+e E+rRR++iN++f++Lr+++P++    ++K +Ka+ L +++eYI+ L
  XP_019185852.1 43 RSKHSETEQRRRSKINERFQTLRDIIPEN----DQKRDKASFLLEVIEYIQFL 91
                    899*************************9....9*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MVRTVKSHHE GDEDDDMEFS SRTLDGSLKM EGRHSDPKAN TLRSKHSETE QRRRSKINER  60
FQTLRDIIPE NDQKRDKASF LLEVIEYIQF LKEKIQIYEG PYQGWSPEPS KLMPWRRASG  120
PVEIFTEQSQ LIRNGSAHED NIVVNSMLLA NAHDSVESDL NGAAVYKTMD ESHTVINEAI  180
PFNIPLQPSL FDGVSVQPSH GSSSYTDQLA SQAQLFDWAD KQEETQSDVP IFDQNDQEEL  240
KTECGEDSLS IEYSQRVLNT LNQTLVSMGV DMSQASVSVE LDIGKRTSSE TSISALGGCE  300
TYDHAHKKLR REQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G38860.11e-52bHLH family protein