PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019186243.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 182aa    MW: 19462.5 Da    PI: 4.7745
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019186243.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.72.3e-094383954
                    HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                     r RR+ri ++f  L++l+P        K++ +++L +A++Y+k L
  XP_019186243.1 43 ARERRHRISDRFKILQSLVPGG-----SKMDTVSMLDEAIHYVKFL 83
                    699*****************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MDNSTCSSSV FNNNSNEENN KKKKKSGGGK VVKLSTDPQS VAARERRHRI SDRFKILQSL  60
VPGGSKMDTV SMLDEAIHYV KFLKTQIWLH QTMINFAAAD DDDLLLRDYD PSYCYSAAAA  120
AGDDDVLAGD YNIQSSQANY GVGPGNYTMP GQGGAAGGGD GGVGLQAGET MAPVDDAFSV  180
YY