PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019186254.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 311aa    MW: 34558.4 Da    PI: 6.5854
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019186254.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY826.3e-26122182158
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                     +dDg++WrKYGqK++ +++fpr+YYrCt++   +C+++k+v+r +e+p +  +tY+g+H++
  XP_019186254.1 122 VDDGHAWRKYGQKVILNTPFPRNYYRCTHKfdqKCQATKQVQRIRENPPLYRTTYNGNHTC 182
                     59***************************9999**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MAHSSPENSS ANRKRAVDGL ILGRNLTCQL REMLKNSDGG HGPPSKVVAE DLVVKILESF  60
NEGISVLGSM DSDEVSQPPC DGRKSEDISS GSCKTSAPKD GRGCYKRRKT CEILVKDSQT  120
LVDDGHAWRK YGQKVILNTP FPRNYYRCTH KFDQKCQATK QVQRIRENPP LYRTTYNGNH  180
TCLNFQKYPQ IILDSTAPGD SSFLLCFGQN GQNNKEVENP TLIKQENKQE FAENLYHNVH  240
HSQIQTSSSG CCLPSDDRPM SSAQWGPAAS SGSEYGDVNS SAGCTHDDLT MQMMSNVDVD  300
DDFTLRFLAD F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-39WRKY family protein