PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019186448.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 212aa    MW: 22798.8 Da    PI: 6.5064
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019186448.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.62.3e-055173123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    + C++C+k Fs+k  L  H++ H
  XP_019186448.1 51 FCCKYCDKKFSTKQALGGHQNAH 73
                    78******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MAAEAIAEIE ELIKVHEVGE DDLQVGAAGG QSGEQADPAP HAAAVRVRLD FCCKYCDKKF  60
STKQALGGHQ NAHRMEKNGN RSGRRGGFMD YDFLHPHFLC SPLAGFPPLP GGGVQVNYSY  120
QAPAATPPYF LPGNSISSPL IPTGRQPYAY PFPPETSSLR SRLPAMSIPG RNSFPVPASR  180
LAGPIVINSN PMNAPEINKD MEDGELDLTL KL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14010.12e-08C2H2 family protein