PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019186492.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 136aa    MW: 16191.3 Da    PI: 8.5015
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019186492.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.61.5e-1026127292
                     EEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS...-EEEEEE.........EEETTEEEE-TTHH.HHHHHHT--TT-EEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesg...rsWevkliy.......rkksgryvltkGWk.eFvkangLkegDfvv 81 
                      k l++sdv +s+rl l k+ ++++    + ++e+      e+++g   ++W++  +        + +sg++vlt+ W+ eFv+  +L++gDf+ 
  XP_019186492.1  26 TKRLSSSDVDSSSRLLLAKEDVKNYvlpfM-DEER--RAACESREGlrvNVWDLDTRSehelslkQWRSGSFVLTSYWSrEFVRRRNLQTGDFIR 117
                     58899*****************999**962.4333..36666766677766666665555555554455689******736************** PP

                     EEE-SSSEE.. CS
              B3  82 Fkldgrsefel 92 
                     ++ d  +++++
  XP_019186492.1 118 LRWDT-ENRRF 127
                     **554.55433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MAQPVLLDLF PIPARMEEGD DGHWITKRLS SSDVDSSSRL LLAKEDVKNY VLPFMDEERR  60
AACESREGLR VNVWDLDTRS EHELSLKQWR SGSFVLTSYW SREFVRRRNL QTGDFIRLRW  120
DTENRRFLFR KSNVQP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33720.13e-14B3 family protein