PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019186509.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WOX

Protein Properties

Length: 146aa MW: 17040.4 Da PI: 9.9288

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019186509.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.9	1.5e-17	25	86	2	57
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++t eqle Leel++k + ps+ee+e+L+ +l +++ ++V++WFqN+R +e++ XP_019186509.1 25 SRRWKPTVEQLEMLEELYYKqrMMRPSTEEIERLSLRLrqlgKIEAKNVFYWFQNQRNRERH 86 58**************9756889*********************************95 PP
2	Wus_type_Homeobox	83.9	1.8e-27	25	86	3	63
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerq 63 + RW Pt eQ+++Leely+ + + P++eei+r++ +L++ Gkie kNVfyWFQN++ Rer+ XP_019186509.1 25 SRRWKPTVEQLEMLEELYYkQRMMRPSTEEIERLSLRLRQLGKIEAKNVFYWFQNQRNRERH 86 78*************98799************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 146 aa Download sequence
MDAEGQQCIG QKVQQGGEEN NKCSSRRWKP TVEQLEMLEE LYYKQRMMRP STEEIERLSL 60 RLRQLGKIEA KNVFYWFQNQ RNRERHPRKR PAIISPAPPA GDLLHNNYNN AAPKRSKPPQ 120 TLSLFPMHGH ADSVSLELTL RPYSPE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	2e-22	WOX family protein