PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019186510.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 189aa    MW: 22310 Da    PI: 9.7716
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019186510.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.79.6e-061234123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    +kC+dCgk + r   Lk H +++
  XP_019186510.1 12 FKCKDCGKEYDRMGKLKYHKNRC 34
                    89******************998 PP
2zf-C2H218.84.3e-06109131123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kC+dCgk + r   Lk H +++
  XP_019186510.1 109 FKCKDCGKEYDRMGKLKDHKNRC 131
                     89******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MAKDNEKKEL VFKCKDCGKE YDRMGKLKYH KNRCAAFQKA NRLRFEVGSD TKLYDRMGKL  60
EDHKNTCAAF QKANQLRFEA MTFVIEQWYG HWVIIYRMAK DNEKKELVFK CKDCGKEYDR  120
MGKLKDHKNR CAAFQKANRL RFEACADTKL YNRMGILEDH KNMCAAFQKA NQLRFEAMTF  180
GLALIPNCP