PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019186652.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YB
Protein Properties Length: 117aa    MW: 13420.1 Da    PI: 5.305
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019186652.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB150.43.5e-47496395
           NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95
                    e++++lPianv+rimk++lPa+akisk+ake +qe +sefi fvt+easdkc++e+rkt+ngdd++wal++lG++dy+e+++ yl+k+re e 
  XP_019186652.1  4 EHEKLLPIANVGRIMKQILPAKAKISKEAKERIQESASEFIRFVTCEASDKCHKENRKTVNGDDIVWALSSLGLDDYAEAMTRYLHKFREYEM 96
                    7899**************************************************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
MGDEHEKLLP IANVGRIMKQ ILPAKAKISK EAKERIQESA SEFIRFVTCE ASDKCHKENR  60
KTVNGDDIVW ALSSLGLDDY AEAMTRYLHK FREYEMLRAS QTRGPPAGED DEETDRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09030.13e-53NF-YB family protein