PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019186738.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family HSF
Protein Properties Length: 250aa    MW: 28923.3 Da    PI: 4.929
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019186738.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind111.46.4e-35251162102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+y ++ed++++++isw+++g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv +++         weF+++ F+kg+++ll++
  XP_019186738.1  25 FLLKTYMLVEDPATDDVISWNDDGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSR---------WEFSNEMFRKGERDLLCD 110
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_019186738.1 111 IRRRKA 116
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MLGPECDRQQ KSLLEYVRKS SPPPFLLKTY MLVEDPATDD VISWNDDGTA FVVWQPAEFA  60
RDLLPTLFKH SNFSSFVRQL NTYGFRKVAT SRWEFSNEMF RKGERDLLCD IRRRKAWSNK  120
PNNNNAQSQD NPPKNNNKDA GDEDQRSSST SSSSEYITLV DENKRLKEEN GVLSSELSTM  180
KRKCRDLLDL VSMYAAASSE EGEEEEEEMR PPLMLFGVRL EVEEEAERER KRKRAEINQT  240
ASLFLSQLCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.19e-72HSF family protein