PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019186956.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 391aa MW: 43073 Da PI: 8.301

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019186956.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41	4.3e-13	253	296	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r++r++kNRe+A rsR+RK+a++ eLe+k+ Le+eN +L+ e XP_019186956.1 253 RRQKRMIKNRESAARSRARKQAYTNELENKISRLEEENARLRRE 296 79***************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MGSEGGCGGT LMQDPKSNGL EREGSLYSLT LDEVHQQFGG LGKPLSSMNL DELLKTVCTA 60 EASQGVQRVD YSGTPLPSGA SLHHQSSLEL SGDLSKKTVD EVWQDIQQGQ KSSNLERKAT 120 LGEMTLEDFL VQARIVAESS QGKNDLGSVQ GDDSTVNVAQ QAHGALFHVP PIQQPRPPQS 180 HQQQVSAMPG FMAAHPVQQA IPVGPNPIMD ATYPGTQMTA ALDPLMGTLS DTQTLGRKRV 240 APDNVVIEKS VERRQKRMIK NRESAARSRA RKQAYTNELE NKISRLEEEN ARLRREKRRR 300 CPPSHLPNQS ISCAEQAQPP SDISPAKKMM HTVCYVSKTC RSIVCYVSKT CCREWCFLLH 360 LCKLAGQTLF RRTSAPPPTL EFLSCMYNFI V

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MGSEGGCGGT LMQDPKSNGL EREGSLYSLT LDEVHQQFGG LGKPLSSMNL DELLKTVCTA  60
EASQGVQRVD YSGTPLPSGA SLHHQSSLEL SGDLSKKTVD EVWQDIQQGQ KSSNLERKAT  120
LGEMTLEDFL VQARIVAESS QGKNDLGSVQ GDDSTVNVAQ QAHGALFHVP PIQQPRPPQS  180
HQQQVSAMPG FMAAHPVQQA IPVGPNPIMD ATYPGTQMTA ALDPLMGTLS DTQTLGRKRV  240
APDNVVIEKS VERRQKRMIK NRESAARSRA RKQAYTNELE NKISRLEEEN ARLRREKRRR  300
CPPSHLPNQS ISCAEQAQPP SDISPAKKMM HTVCYVSKTC RSIVCYVSKT CCREWCFLLH  360
LCKLAGQTLF RRTSAPPPTL EFLSCMYNFI V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-61	bZIP family protein