PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019187214.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 304aa    MW: 33783.1 Da    PI: 4.482
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019187214.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.7e-10121164755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       Er+RR r+++ +  Lr+l+P+      +K++Ka+i   Av Y+++Lq
  XP_019187214.1 121 VCERKRRGRMKEMLYSLRSLVPNI-----TKMDKASIIADAVLYVQDLQ 164
                     57*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MDNVNFPQGN DRDLGLIDFM DEENLEQFID LIRGENEEPM GAMFFQQESY GCENISGYLA  60
DDGQGLFEYD NVGSYMLSSA NVSGDDVVNI LPTGENDAGE VSSETTPEKK GTKADRSKTL  120
VCERKRRGRM KEMLYSLRSL VPNITKMDKA SIIADAVLYV QDLQMQTKKL KAEIANLESS  180
TTKTDKYEGG TTFLGGKKTN FTNTLPILKK IFKMDVFQVE ETGFYVRIVS SKGQQVAASL  240
YKAVDSLASL FISSSNLATA SHNYVFTFTF TVRECESDIN LPNLKLWIAS AFLNQGFGFE  300
ASLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.11e-69bHLH family protein