PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019187227.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 257aa MW: 29063.6 Da PI: 5.4716

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019187227.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	134.6	6.5e-42	8	139	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk...kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 ppGfrF Pt+eelv++yLk+k+eg+ e +v i+ ++iy+++Pw+Lp+ k++ + ++w+fF++ ++++a+g r++r t+ gyWkatg+ XP_019187227.1 8 PPGFRFFPTEEELVSFYLKNKLEGRFEEHIDVvIPVLNIYDHDPWSLPQfagKYNRsDPEQWFFFIPMQEREARGGRPTRLTAGGYWKATGSPGL 102 8*********************9966656659999*******646633332556******************************* PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s +++++g k+t+vfy+grap+g+kt+W m+eyr+ XP_019187227.1 103 VYSGNNRVIGGKRTMVFYTGRAPNGRKTEWKMKEYRF 139 *********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MEEDDFPPPG FRFFPTEEEL VSFYLKNKLE GRFEEHIDVV IPVLNIYDHD PWSLPQFAGK 60 YNRSDPEQWF FFIPMQEREA RGGRPTRLTA GGYWKATGSP GLVYSGNNRV IGGKRTMVFY 120 TGRAPNGRKT EWKMKEYRFS EREASNNSPQ EFILCRVYKK PKCARAFDRR PACMAPAPPA 180 AEGGEPALLQ PPPPPMAAAA NDASASTSLQ KADKKSSSQE TSSPSPPHGG DSVEDDPVWD 240 FSDQILFEWD PFKILYN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	6e-61	NAC family protein