PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019187314.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 350aa    MW: 38840.5 Da    PI: 6.7955
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019187314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.18.8e-10203250455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN ++  L+el+P +    +k    a++L + ++++++Lq
  XP_019187314.1 203 SHSLAERARREKINARMKLLQELVPGC----NKISGTAMVLDEIINHVQYLQ 250
                     8*************************9....89999***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MESIEGAQVR SIICGTEHGE NGVGAQQFGD DGGLHSMMTV PPETGSSFTA LLELPANQAV  60
ELLVHSPATK LPEIEPQRNF YPRCPPPPPI FPSDIALIDR ASKFSVFAGN SPETTSIPSN  120
SSWKPNFVKP EPLDSDSNPN SSPGVSNPTV NQNQKSTKRK DREKKVKESS KKNKKSANNT  180
SEDGDERCPY VHVRARRGQA TDSHSLAERA RREKINARMK LLQELVPGCN KISGTAMVLD  240
EIINHVQYLQ RQVEFLSMRL ATVNPRIDFN VDTLFAAETG SPVESNFPGM IMPSMWPEGQ  300
ANGNRQPYQQ LWHFNGLHRP VWSREDENSL LTYDSTNPAS LHANQLKMEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.27e-75bHLH family protein