PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019188080.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 390aa MW: 39951.1 Da PI: 9.4894

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019188080.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.3	8e-39	75	133	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 e+alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s XP_019188080.1 75 ETALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRS 133 6789*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MVFSSIPAYL DPANWQQQLN HQVGTSIQTT QLPSAQPAAV AAAAAAPPPP HGSAGTIRPG 60 SMADRARLAN MPIPETALKC PRCESTNTKF CYFNNYSLTQ PRHFCKTCRR YWTRGGALRN 120 VPVGGGCRRN KRSGKGGSSS GGGGSASKSP SNSSERQAGS SSCSGVSTSS INISGNSAAG 180 LLGGAGLSPQ IPPMRFMSPL GQLSEHYTAG NDNIGLNINY TGLSAMAGRD NFPFQFGNNN 240 NNNNNSNNNN NLLGLGGGGG GGPGGGGGLA SLLSGGIEQW RLQTPILGGL DLSPSPGLYQ 300 FPGGPEAAPS GFLGGEASET RPKFTSSSML TTQMASVKME DHNNQESSMA RQLLGFQPGN 360 DQWGGGGGGA AAAWSDVSAS FTSSSTSNRL

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MVFSSIPAYL DPANWQQQLN HQVGTSIQTT QLPSAQPAAV AAAAAAPPPP HGSAGTIRPG  60
SMADRARLAN MPIPETALKC PRCESTNTKF CYFNNYSLTQ PRHFCKTCRR YWTRGGALRN  120
VPVGGGCRRN KRSGKGGSSS GGGGSASKSP SNSSERQAGS SSCSGVSTSS INISGNSAAG  180
LLGGAGLSPQ IPPMRFMSPL GQLSEHYTAG NDNIGLNINY TGLSAMAGRD NFPFQFGNNN  240
NNNNNSNNNN NLLGLGGGGG GGPGGGGGLA SLLSGGIEQW RLQTPILGGL DLSPSPGLYQ  300
FPGGPEAAPS GFLGGEASET RPKFTSSSML TTQMASVKME DHNNQESSMA RQLLGFQPGN  360
DQWGGGGGGA AAAWSDVSAS FTSSSTSNRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	2e-43	Dof family protein