PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019188290.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YB
Protein Properties Length: 174aa    MW: 19397.8 Da    PI: 5.8844
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019188290.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB168.96.3e-5329125197
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     ++eqdr+lPianv+rimkk+lP nakisk+ak t+qecvsefisfvt+easdkc++ekrkt+ngdd++wal++lGf+dy++plk yl+++re+eg
  XP_019188290.1  29 MKEQDRLLPIANVGRIMKKILPPNAKISKEAKLTMQECVSEFISFVTGEASDKCRKEKRKTVNGDDVCWALGSLGFDDYAAPLKRYLHRHREMEG 123
                     589******************************************************************************************** PP

           NF-YB  96 ek 97 
                     e+
  XP_019188290.1 124 ER 125
                     97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MVDNIMQGFE YSSAGARCSS GTGGEDGVMK EQDRLLPIAN VGRIMKKILP PNAKISKEAK  60
LTMQECVSEF ISFVTGEASD KCRKEKRKTV NGDDVCWALG SLGFDDYAAP LKRYLHRHRE  120
MEGERANQSK SVAGERSTDE REEEEEGAPI MYIRESVGQS NFCPTASRTN NFMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.12e-60NF-YB family protein