PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019188364.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 157aa    MW: 17481.3 Da    PI: 10.0713
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019188364.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.6e-202172256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+G+r+++ +g+++AeIrdp+ ng  +r +lg+f+tae+Aa+a+++a+ +++g+
  XP_019188364.1 21 KYRGIRRRP-WGKYAAEIRDPNRNG--ARLWLGTFDTAEDAARAYDRAAYAFRGH 72
                    8********.**********96665..*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MRKRSGNVKM ENEERVRREN KYRGIRRRPW GKYAAEIRDP NRNGARLWLG TFDTAEDAAR  60
AYDRAAYAFR GHQAILNFPN DGHYASGGNV VAAAPGPSSS GSYSTPPPPS SPPPSSSSSV  120
YVPSFSTSED KIIEFEYLDN NLLEDLLGSQ VNKRSKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.14e-25ERF family protein