PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019188413.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 252aa    MW: 28097.7 Da    PI: 7.8811
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019188413.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.11.5e-32178236159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+
  XP_019188413.1 178 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHS 236
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MEGDEGRSGL PNYGLQVSFS TPHHPHHHHH HHPHAAMHHE MGFVQFEDHN QAVMSFLTPL  60
SSSSQPLDGS SSCSNAASTT AAAAKSTSNA AAATASLGFS HSEPQLSNRP SWNNNDQVVG  120
TMDPKGANDE NCSGNAAEGN NSWWRSSSSL VDKGKVKVRR KLREPRFCFQ TRSDVDVLDD  180
GYKWRKYGQK VVKNSLHPRS YYRCTHSNCR VKKRVERLSE DCRMVITTYE GRHNHSPCDD  240
SNSSEHDCFT SF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157163KVRRKLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.14e-70WRKY family protein