PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019188420.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 251aa    MW: 27998.6 Da    PI: 7.8811
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019188420.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.21.5e-32177235159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+
  XP_019188420.1 177 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHS 235
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MEGDEGRSGL PNYGLQVSFS TPHHPHHHHH HHPHAAMHHE MGFVQFEDHN QAVMSFLTPL  60
SSSSQPLDGS SSCSNAASTT AAAAKSTSNA AAATASLGFS HSEPQLSNRP SWNNNDQVGT  120
MDPKGANDEN CSGNAAEGNN SWWRSSSSLV DKGKVKVRRK LREPRFCFQT RSDVDVLDDG  180
YKWRKYGQKV VKNSLHPRSY YRCTHSNCRV KKRVERLSED CRMVITTYEG RHNHSPCDDS  240
NSSEHDCFTS F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156162KVRRKLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.14e-69WRKY family protein