PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019188750.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 221aa    MW: 23987.8 Da    PI: 8.4786
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019188750.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.56.8e-1354100250
             AP2   2 gykGVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaar 50 
                     +y GVr+ + +g ++AeIrdp+  +g   r++lg++ tae+Aa a+++a+
  XP_019188750.1  54 RYGGVRRWP-WGEFAAEIRDPRRkGG--GRVWLGTYETAEDAAVAYDQAA 100
                     699**9999.**********754343..9*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MLDCGVMNPE MYEETMSDDN DLFLVERLLG NSDVSEMLSA MTQPGPAGAQ DWRRYGGVRR  60
WPWGEFAAEI RDPRRKGGGR VWLGTYETAE DAAVAYDQAA FLDSMEQHLL HGSDVVSGLL  120
FPVPPSPREN PSSGDAWVEI MYRSPRSSAA GRAIARRLGR RRPRGERSGR RKAGSATEAC  180
GGGRGHVRGG DKGSGEKRRE DVAGDLLAAG GCGGGLRPRR L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.16e-12ERF family protein