PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019188786.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family FAR1
Protein Properties Length: 214aa    MW: 23676 Da    PI: 8.6539
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019188786.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR162.21.5e-1964150290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                      YneYA++vGFsvrk +++++  +++i +++f C+k g++++ ++    +  ++   r+g  a ++     dg+w vtk ++ HnHel+
  XP_019188786.1  64 LYNEYAYRVGFSVRKGQQRYKASTKTIQMKRFFCYKAGFKAKANSG--VNLYSKIDIRMGFGAFVQFDVGGDGRWTVTKHVKVHNHELC 150
                     7****************************************99887..8888999*********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MEEATNPGDL IGDGLSTIPV NEDLVGDSLI GDQSDVNIDG SSSIPAVEDL VGVVVSNGDE  60
AFDLYNEYAY RVGFSVRKGQ QRYKASTKTI QMKRFFCYKA GFKAKANSGV NLYSKIDIRM  120
GFGAFVQFDV GGDGRWTVTK HVKVHNHELC ALDKSHLFRS HRRVRNNQIS YLKDLKKSGV  180
AVADGMRLLK HQSGGLHLLG SPIEMLTIHW LMIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-14FAR1 family protein