PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019188875.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 272aa    MW: 29224.8 Da    PI: 6.5182
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019188875.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-1892142256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr +  +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g+
  XP_019188875.1  92 TYRGVRKRN-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKGH 142
                     69****887.**********843...6***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MGRQAIEPLG HDYYSATPIA TSSTSTASHS GDYGGSNSPS TTTITTTSSS SSSSSSSKSS  60
KGNKGSKRGQ EAKTGGGNKK RRKVEGGEKH PTYRGVRKRN WGKWVSEIRE PRKKSRIWLG  120
TYPTAEMAAR AHDVAALAIK GHSAYLNFPH LADQLPRPAS NSPKDIQAAA AMAAETTFDD  180
NDEVSHGESI EAEPSRAELP SSQSSSNLTS ESMQESLNSP SGYGGVDDTF FDLPDLSLDG  240
ANQNDHYVST WQLVGVDPGG FRLEEPFLWE CY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17983KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.13e-65ERF family protein