PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019188972.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family TCP
Protein Properties Length: 160aa    MW: 17561.8 Da    PI: 7.597
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019188972.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP65.42e-2048961061
             TCP 10 kihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaike 61
                    k+   + g++RRvRl+ +caar+F+L++eLG+ +d++t+eWLl+   p++  
  XP_019188972.1 48 KR---GKGSGRRVRLPPLCAARIFQLTRELGHRTDGQTVEWLLRHVHPSVFP 96
                    44...6799************************************9999854 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MEPYRYNATR QEDETFVVLP SPYPRPSPPP LSSSTPAPLA PARPVTKKRG KGSGRRVRLP  60
PLCAARIFQL TRELGHRTDG QTVEWLLRHV HPSVFPSSYA ATAVDSPSSA TEDLSPPYYP  120
QIPAAVPETD QDAVGPTSFT ALLMQAEKGD FVVKQEMGDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08330.13e-18TCP family protein