PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019188993.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Dof
Protein Properties Length: 242aa    MW: 26030.7 Da    PI: 8.7869
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019188993.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.71.5e-393192263
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                    kekal+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG++rnvPvGgg+rkn++sss
  XP_019188993.1 31 KEKALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSMRNVPVGGGSRKNRRSSS 92
                    6899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MDTAHQWPQG IGVVENVVET TRGEKKPRPE KEKALNCPRC NSTNTKFCYY NNYSLSQPRY  60
FCKTCRRYWT EGGSMRNVPV GGGSRKNRRS SSSFSSSSSS LSSSSSASKK LPDHSAPSPC  120
FLLNPNNAGQ DLNLAYPPPN SGILHHLNPF HIPIPGSDPS TAVFSSGLLF PLHDVKPAAL  180
DGFGNNGFGN HQVEESGAAR VFFPNLEDLK SGFDQYRAQG ESNGYWNGTH GGSAAGGGGG  240
GW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.13e-39Dof family protein