PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019189025.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Nin-like
Protein Properties Length: 249aa    MW: 28044.9 Da    PI: 6.3657
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019189025.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK81.11.1e-25141189452
          RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                      +++++++kyF  pi++AAkeL+v+lT+LK++CR+++I+RWPhRkiksl
  XP_019189025.1 141 ALEFDEIQKYFCVPITKAAKELKVGLTALKKRCRELNISRWPHRKIKSL 189
                     799********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MDPTPFNNVV VHPKLENQNA NAAAAAAADW LFFDDYYTNL MATTWDEESG FCESFNNCGG  60
GSNILGDLDL DKMCGDLNVW DYDDPSAAIF KEEEEEEEGR SGSSGGSNNN GDNTETMRIG  120
AGMKRKKKVG GGERCCKKPA ALEFDEIQKY FCVPITKAAK ELKVGLTALK KRCRELNISR  180
WPHRKIKSLA SLIHNIKELG MGNEIEMLEE HKRMVECIPE MELTERTKKL RQACFKANYK  240
RRKSLPHIP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.13e-43Nin-like family protein