PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019189515.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family HD-ZIP
Protein Properties Length: 816aa    MW: 88527.8 Da    PI: 5.9597
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019189515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.51.5e-20117172156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe+lF+++++p++++r eL+k+l L+ rqVk+WFqNrR+++k
  XP_019189515.1 117 KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLDIRQVKFWFQNRRTQMK 172
                     688999***********************************************999 PP
2START206.97.8e-653265501206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela++a++elvk+a+a+ep+Wv+s     e +n++ ++++f++  +     + +ea+r++g+v+ +++ lve+l+d++ +W e+++    + +t+
  XP_019189515.1 326 ELALAAMDELVKMAQADEPLWVRSMeegrEVLNQEQYVKTFTPCIGlrpngFVSEASRETGMVIINSMALVETLMDSN-KWAEMFPcliaRTSTT 419
                     5899*********************999999**********99988********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     +vi sg      galqlm+aelq+lsplvp R++ f+R+++q+ +g+w++vdvS+d  ++ +  + +  +++lpSg+++++++ng+skvtwveh+
  XP_019189515.1 420 DVIASGmggtrnGALQLMYAELQVLSPLVPvREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPVFPNSRRLPSGCVVQDMPNGYSKVTWVEHA 514
                     ************************************************************99899999*************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++++++h+l+r++++ g+ +ga++wvatlqrqce+
  XP_019189515.1 515 EYEESVVHQLYRQMISAGMGFGAQRWVATLQRQCEC 550
                     **********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 816 aa     Download sequence    
MNFGGFLDNS FAGGFGGGGG GGAMPSGPVA HPCLVPQSLA KSMFNSPGLS LALQTGMEGQ  60
GEVARIGESY EANNNGGHNG SGRRSREEEP ESRSGSDNLE GVSGDDQDAA DDKPPRKKRY  120
HRHTPQQIQE LEALFKECPH PDEKQRLELS KRLCLDIRQV KFWFQNRRTQ MKTQLERHEN  180
SILRQENDKL RAENMAIREA LRNPICNNCG APAMIGEISL EEQHLRIENV RLKDELDRVC  240
ALAGKFLGRP VSSLTTSMAP PLPNSSLELG VGSNGFGELS VVPTTTTMPL APPDFSVGIS  300
SSLPVVQPTR HVNGIEKSLE RSMYLELALA AMDELVKMAQ ADEPLWVRSM EEGREVLNQE  360
QYVKTFTPCI GLRPNGFVSE ASRETGMVII NSMALVETLM DSNKWAEMFP CLIARTSTTD  420
VIASGMGGTR NGALQLMYAE LQVLSPLVPV REVNFLRFCK QHAEGVWAVV DVSIDTIRET  480
SGAPVFPNSR RLPSGCVVQD MPNGYSKVTW VEHAEYEESV VHQLYRQMIS AGMGFGAQRW  540
VATLQRQCEC LAILMSSTLP TRDHTAITPG GRRSMLKLAQ RMTNNFCAGV CASTVHKWNK  600
LCAGNVDDDV RVMTRKSVDD PGEPPGIVLS AATSVWLPIS PGRLFDFLRD ERLRSEWDIL  660
SNGGPMQEMA HIAKGQDHGN CVSLLRASAI NANQSSMLIL QETCIDAAGS LVVYAPVDIP  720
AMHVVMNGGD SAYVALLPSG FAIVPDGPGC RGGPNAENGG VPEHRGGGGG SLLTVAFQIL  780
VNSLPTAKLT VESVETVNNL ISCTVQKIKA ALHCES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein