PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019189648.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Dof
Protein Properties Length: 258aa    MW: 27814.6 Da    PI: 6.4131
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019189648.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.11.9e-383290462
          zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    ++lkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk  k+s
  XP_019189648.1 32 AELKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGSRKTTKRS 90
                    6789**************************************************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MQDVHPIGGG GARMFAGGGD RRLRPNHHHL TAELKCPRCD SLNTKFCYYN NYNLSQPRHF  60
CKSCRRYWTK GGVLRNVPVG GGSRKTTKRS KQKTAESSSS PQQPESNSHS SSESSSITAA  120
AAAAAVGATE VVAESANDQP LMDHSTDGQI FQELGCFTTL MTSSDDPSLV VEFTDAAAAD  180
TLRLQWGPQA KMDGEDGKMQ EITAAGFLDD ATQSRRSNGG LSPLDWQIGG GQGHGLFDLT  240
GAVDQSYWND DHTLNYLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60850.12e-31Dof family protein