PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019189702.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 379aa    MW: 40653 Da    PI: 5.2192
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019189702.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-193586156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                    +++ GVr+++ +grWvAeI+d      ++ r +lg+f+taeeAa+a+++a++ l+g+
  XP_019189702.1 35 PRFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEEAARAYDRAARTLRGA 86
                    6799******.7*********....4456*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MKQTSPPPPP PQEKLPPPPS DVIRTRRKPS SRGHPRFVGV RQRPSGRWVA EIKDSLQKVR  60
LWLGTFDTAE EAARAYDRAA RTLRGANART NFDLPESDSG EGGRNLLPEN LEPFSFEDAC  120
RSEEPEGGLV GALKAKLFSS ESSRLFIQSS AYNATPSTNA KPQDENLNIL KNNDGGDKIS  180
SMAAAAAQFS STNGLIDATS TSYLPNVVGA EKPKFNLDHY TPQTEQNTNI HHNYNIDHIS  240
LLTASDHPMN TPWLNPSHTI AATSGMMQWP NDQTVGWIDT LQTGGRGGHE MESCSWLPIS  300
AGLSSSYPEN SLDILNTTPM MMSQIGGASG AGGGALPAET QIVQCENEYW NSSSAAAAAA  360
VTGASGGAWD PFMLSSVLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.17e-18ERF family protein